I use the pc version, just because I have a general aversion to storing any kind of personal information on-line - I may be a bit paranoid, but I'm the same way with other data. That said, I don't believe there is a significant difference in the tracking abilities of both, except I think the pc version has more reports available (not that I really look at anything beyond average calories, nutrition breakdowns and fat/protein/carb breakdowns).
I think they have a trial period where you can download the pc version and try it out to decide if you like it. Why not try out both versions and decide if the $20 is worth it to you.
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